|
|
|
|
|
|
Wavelength Selection Method of Algal Fluorescence Spectrum Based on Convex Point Extraction From Feature Region |
ZHANG Yong-bin1, ZHU Dan-dan1, CHEN Ying1*, LIU Zhe1, DUAN Wei-liang1, LI Shao-hua2 |
1. Hebei Province Key Laboratory of Test/Measurement Technology and Instrument, School of Electrical Engineering, Yanshan University, Qinhuangdao 066004, China
2. Hebei Sailhero Environmental Protection Hi-tech Co., Ltd., Shijiazhuang 050000, China
|
|
|
Abstract The frequent occurrence of algal bloom seriously affects the Marine environment and human production activities, so it is very important to monitor the phytoplankton in water.3D fluorescence spectroscopy has been widely used in the analysis of algae community composition and the quantitative analysis of algae concentration in water phytoplankton. However, the information redundancy in 3D fluorescence spectrum data has significantly impacted the qualitative and quantitative analysis of algae.In order to solve the problem of spectral information redundancy, a new wavelength selection method of 3D fluorescence spectrum based on the combination of feature region and convex point extraction is proposed.Taking Aureococcus anophagefferens, Chlorella Vulgaris, and Synechococcus elongatus as the research object, the Savitzky-Golay convolution smoothing method was used to preprocess the 3D fluorescence spectrum to solve the problem of spectral noise caused by external factors. The Mahalanobis distance method was used to eliminate the abnormal spectral samples in the 3D fluorescence spectrum data set.The residual concentration method was used to eliminate the abnormal concentration value samples in the 3D fluorescence spectrum data set.Then the reliability of the convex points under different characteristic regions was measured by the root mean square error of cross-validation (RMSECV) of the PLS regression model, and the wavelength variable was selected. In order to verify the effectiveness of the wavelength selection method, the PLS regression model was established for the three algae species, and the determination coefficient (R2) and root mean square error of cross-validation (RMSECV) were used as the evaluation indexes of the model. Compared with the regression model established with the full spectrum data, the wavelength variables of Aureococcus anophagefferens, Chlorella Vulgaris, and Synechococcus elongatus respectively decreased from 1 071 to 77, 75 and 67, and R2 respectively increased by 0.016 4, 0.002 and 0.032 4. RMSECV was respectively reduced by 1.8×105, 2.0×105 and 2.6×105. Compared with the UVE method, the wavelength variables of Aureococcus anophagefferens, Chlorella Vulgaris, and Synechococcus elongatus were respectively reduced by 599, 357 and 317, and R2 was respectively increased by 0.014 5, 0.000 4 and 0.012 3, RMSECV was respectively decreased by 1.6×105, 7.0×104 and 1.6×105. After the selection of wavelength variables by the method of feature region combined with convex point extraction, the redundant information is reduced, and the model’s prediction ability is improved.
|
Received: 2021-08-09
Accepted: 2021-10-22
|
|
Corresponding Authors:
CHEN Ying
E-mail: chenying@ysu.edu.cn
|
|
[1] Nunes S, Latasa M, Delgado M, et al. Deep-Sea Research Part Ⅰ, 2019, 151(5): 103059.
[2] Nankabirwa A, DeCrop W, Vander Meeren T, et al. Ecological Indicators, 2019, 107: 105563.
[3] PU Shu-juan, HE Pei-xiang, ZHANG Yue, et al(蒲淑娟, 贺培翔, 张 悦,等). Petrochemical Industry Application(石油化工应用), 2021, 40(5): 102.
[4] CHEN Yuan-yuan, WANG Zhi-bin, WANG Zhao-ba(陈媛媛, 王志斌, 王召巴). Spectroscopy and Spectral Analysis(光谱学与光谱分析), 2017, 37(1): 299.
[5] Zhang Chu, Liu Fei, Kong Wenwen, et al. Sensors, 2015, 15(7): 16576.
[6] XIONG Zhi-xin, MA Pu-fan, LIANG Long, et al(熊智新, 马璞璠, 梁 龙,等). Transactions of China Pulp and Paper(中国造纸学报), 2019, 34(4): 46.
[7] HUA Chen-zhi, ZHAO Ling, SONG Jian-jun(花晨芝, 赵 凌, 宋建军). Journal of Sichuan Normal University(四川师范大学学报), 2019, 42(6): 825.
[8] MAI Shu-kui, YANG Yang, ZHAO Xiao-bo, et al(买书魁, 杨 洋, 赵小波,等). Food Science and Technology(食品科技), 2019, 44(2): 301.
[9] Chang Haitao, Zhu Lianqing, Lou Xiaoping, et al, Sensors, 2016, 16(6): 827.
[10] CHEN Shi-yu, LI Yan, LI Ai-min(陈诗雨, 李 燕, 李爱民). Environmental Science & Technology(环境科学与技术), 2015, 38(5): 64.
[11] ZHANG Xue-mao(张学茂). Journal of Langfang Teachers College(廊坊师范学院学报), 2011, 11(4): 18.
[12] SHI Lu-zhen, ZHANG Jing-chuan, WANG Yan-qun, et al(石鲁珍, 张景川, 王彦群,等). Journal of Chinese Agricultural Mechanization(中国农机化学报), 2016, 37(6): 99.
|
[1] |
LEI Hong-jun1, YANG Guang1, PAN Hong-wei1*, WANG Yi-fei1, YI Jun2, WANG Ke-ke2, WANG Guo-hao2, TONG Wen-bin1, SHI Li-li1. Influence of Hydrochemical Ions on Three-Dimensional Fluorescence
Spectrum of Dissolved Organic Matter in the Water Environment
and the Proposed Classification Pretreatment Method[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(01): 134-140. |
[2] |
GU Yi-lu1, 2,PEI Jing-cheng1, 2*,ZHANG Yu-hui1, 2,YIN Xi-yan1, 2,YU Min-da1, 2, LAI Xiao-jing1, 2. Gemological and Spectral Characterization of Yellowish Green Apatite From Mexico[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(01): 181-187. |
[3] |
SONG Yi-ming1, 2, SHEN Jian1, 2, LIU Chuan-yang1, 2, XIONG Qiu-ran1, 2, CHENG Cheng1, 2, CHAI Yi-di2, WANG Shi-feng2,WU Jing1, 2*. Fluorescence Quantum Yield and Fluorescence Lifetime of Indole, 3-Methylindole and L-Tryptophan[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(12): 3758-3762. |
[4] |
LI Wei1, TAN Feng2*, ZHANG Wei1, GAO Lu-si3, LI Jin-shan4. Application of Improved Random Frog Algorithm in Fast Identification of Soybean Varieties[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(12): 3763-3769. |
[5] |
YANG Ke-li1, 2, PENG Jiao-yu1, 2, DONG Ya-ping1, 2*, LIU Xin1, 2, LI Wu1, 3, LIU Hai-ning1, 3. Spectroscopic Characterization of Dissolved Organic Matter Isolated From Solar Pond[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(12): 3775-3780. |
[6] |
XUE Fang-jia, YU Jie*, YIN Hang, XIA Qi-yu, SHI Jie-gen, HOU Di-bo, HUANG Ping-jie, ZHANG Guang-xin. A Time Series Double Threshold Method for Pollution Events Detection in Drinking Water Using Three-Dimensional Fluorescence Spectroscopy[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(10): 3081-3088. |
[7] |
KONG De-ming1, LIU Ya-ru1, DU Ya-xin2, CUI Yao-yao2. Oil Film Thickness Detection Based on IRF-IVSO Wavelength Optimization Combined With LIF Technology[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(09): 2811-2817. |
[8] |
JIA Yu-ge1, YANG Ming-xing1, 2*, YOU Bo-ya1, YU Ke-ye1. Gemological and Spectroscopic Identification Characteristics of Frozen Jelly-Filled Turquoise and Its Raw Material[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(09): 2974-2982. |
[9] |
YANG Xin1, 2, XIA Min1, 2, YE Yin1, 2*, WANG Jing1, 2. Spatiotemporal Distribution Characteristics of Dissolved Organic Matter Spectrum in the Agricultural Watershed of Dianbu River[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(09): 2983-2988. |
[10] |
ZHU Yan-ping1, CUI Chuan-jin1*, CHENG Peng-fei1, 2, PAN Jin-yan1, SU Hao1, 2, ZHANG Yi1. Measurement of Oil Pollutants by Three-Dimensional Fluorescence
Spectroscopy Combined With BP Neural Network and SWATLD[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(08): 2467-2475. |
[11] |
QIU Cun-pu1, 2, TANG Xiao-xue2, WEN Xi-xian4, MA Xin-ling2, 3, XIA Ming-ming2, 3, LI Zhong-pei2, 3, WU Meng2, 3, LI Gui-long2, 3, LIU Kai2, 3, LIU Kai-li4, LIU Ming2, 3*. Effects of Calcium Salts on the Decomposition Process of Straw and the Characteristics of Three-Dimensional Excitation-Emission Matrices of the Dissolved Organic Matter in Decomposition Products[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(07): 2301-2307. |
[12] |
YAO Kun-shan1, SUN Jun1*, CHEN Chen2, XU Min1, CHENG Jie-hong1, ZHOU Xin1. Non-Destructive Identification for Panax Notoginseng Powder of Different Parts Based on Hyperspectral Imaging Technique[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(07): 2027-2031. |
[13] |
SHI Chuan-qi1, LI Yan2, HU Yu3, YU Shao-peng1*, JIN Liang2, CHEN Mei-ru1. Fluorescence Spectral Characteristics of Soil Dissolved Organic Matter in the River Wetland of Northern Cold Region, China[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(05): 1517-1523. |
[14] |
LI Yuan-jing1, 2, CHEN Cai-yun-fei1, 2, LI Li-ping1, 2*. Spectroscopy Study of γ-Ray Irradiated Gray Akoya Pearls[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(04): 1056-1062. |
[15] |
LIU Xia-yan1, CAO Hao-xuan1, MIAO Chuang-he1, LI Li-jun2, ZHOU Hu1, LÜ Yi-zhong1*. Three-Dimensional Fluorescence Spectra of Dissolved Organic Matter in Fluvo-Aquic Soil Profile Under Long-Term Composting Treatment[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43(03): 674-684. |
|
|
|
|