|
|
|
|
|
|
The Experimental and Theoretical Study of Vibrational Spectroscopy for 2,5-Dichloropyrimidine |
CHEN Heng-jie1, FANG Wang1, ZHANG Jia-wei1*, CHEN Shuang-kou2 |
1. Department of Physics, School of Mathematics, Physics and Data Science, Chongqing University of Science and Technology, Chongqing 401331, China
2. Department of Applied Chemistry, School of Chemistry and Chemical Engineering, Chongqing University of Science and Technology, Chongqing 401331, China
|
|
|
Abstract Fourier transforms infrared (FT-IR) spectra in the range of 400~4 000 cm-1 was ollected for 2,5-dichloropyrimidine (2,5-DCP) in solid phase as well as in liquid phase using four sample preparation methods: KBr pressed (KBr), mineral oil (Nujol), attenuated total reflection (ATR) and melting (Liquid), while Fourier transforms Raman (FT-Raman) and laser Raman (Laser-Raman) spectra in the range of 80~3 200 cm-1 was also recorded. To correctly interpret the experimentally obtained vibrational spectra, the geometry of 2,5-DCP was first optimized by applying 14 methods from density function theory (DFT) as well as second-order perturbation method (MP2), based on which its harmonic frequency, infrared intensity and Raman activity were obtained, followed by the conversion of Raman activity to Raman intensity. To consider the anharmonic effect, the perturbation calculation is performed near the equilibrium geometry to obtain the third and fourth-order force fields in normal coordinates, and the anharmonic vibration frequency and intensity of 2,5-DCP are obtained based on the vibration second-order perturbation (VMP2) theory. It is found that the anharmonic vibration frequencies calculated by B3LYP and B3PW91 have the smallest difference from the experimental values. Based on the preferred B3LYP method, the effect of the basis sets on the vibration frequency continued to be investigated, eight basis sets were adopted, and it was found that the difference between the 6-311++G(2pd, 2df) level and the experimental values was the smallest, with a root-mean-square error(RMSE) of 6.75 cm-1 (4.63 cm-1 under 22 vibration modes), the 6-311++G(d, p) greatly reduced the calculation time, while the accuracy of 6-311++G(d, p) is not much lost (6.79 cm-1). In summary, the anharmonic vibrational spectra calculated based on the B3LYP method combined with the 6-311++G(2df, 2pd) basis set are the best choice for assigning the experimental vibrational spectra of the 2,5-DCP. Then, according to the optimal calculation results and the vibrational fundamental frequencies obtained by the scaling factor method, combined with the anharmonic vibrational intensity, the schematic diagram of the normal coordinates analysis, the potential energy distribution (PED) of the vibrations, and compared to the experimentally acquired infrared and Raman spectra, all fundamental frequencies and some overtones of the 2,5-DCP were assigned, and two vibrational couplings were found, One is caused between 3 054 cm-1 and the combination tones of 1 554 and 1 540 cm-1; the other is from the coupling between 1 132 cm-1 and the sum frequency 793+351 cm-1 and the difference frequency 1 370~230 cm-1. Finally, the anharmonic vibrational spectra of 2,5-DCP under multiple isotopic substitutions were expected and the correctness of the attribution was checked again.
|
Received: 2023-05-08
Accepted: 2024-01-08
|
|
Corresponding Authors:
ZHANG Jia-wei
E-mail: physics_zjw@126.com
|
|
[1] Norman J P, Larson N G, Entz E D, et al. J. Org. Chem., 2022, 87(11): 7414.
[2] Alexander J B, Paul T B, Hamish M, et al. J. Phys. Chem., 1996, 100(30): 12280.
[3] Tran S B, Maxwell B D, Wu H, et al. J. Label. Compd. Radiopharm., 2011, 54(13): 813.
[4] Cao K, Tran S B, Maxwell B D, et al. J. Label. Compd. Radiopharm., 2012, 55(8): 300.
[5] Barone V, Puzzarini C. Annu. Rev. Phys. Chem., 2023, 74(1): 29.
[6] Yu H, Ryosuke T, Nuwan D S, et al. J. Chem. Phys., 2019, 151: 064104.
[7] Anna K K, Sandra L. Phys. Chem. Chem. Phys., 2022, 24: 28109.
[8] Kale E K, Peter R F, Gregory T P, et al. J. Chem. Phys., 2022, 157: 084311.
[9] Frisch M J, Trucks G W, Schlegel H B, et al. Gaussian-09, Revision D.01, Gaussian Inc, Wallingford CT, 2013.
[10] Jamroz M H. Vibrational Energy Distribution Analysis VEDA 4, Warsaw, 2004.
[11] https://sdbs.db.aist.go.jp
[12] WENG Shi-fu, XU Yi-zhuang(翁诗甫, 徐怡庄). Analysis by Fourier Transform Infrared Spectroscopy(傅里叶变换红外光谱分析). Beijing: Chemical Industry Press(北京: 化学工业出版社), 2010. 291.
|
[1] |
WANG De-ying1, 2, SHENG Wan-li3, ZOU Ming-qiang1, PEI Jia-huan1, 2, LUO Yun-jing2, QI Xiao-hua1*. Research Progress of Detection Based on Hydrogel Surface Enhanced
Raman Spectroscopy (SERS) Substrate[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(10): 2701-2708. |
[2] |
MAO Li-yu1, 2, BIN Bin1*, ZHANG Hong-ming2*, LÜ Bo2, 3*, GONG Xue-yu1, YIN Xiang-hui1, SHEN Yong-cai4, FU Jia2, WANG Fu-di2, HU Kui5, SUN Bo2, FAN Yu2, ZENG Chao2, JI Hua-jian2, 3, LIN Zi-chao2, 3. Development of Wheat Component Detector Based on Near Infrared
Spectrum[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(10): 2768-2777. |
[3] |
JIANG Xiao-gang1, 2, HE Cong1, 2, JIANG Nan3, LI Li-sha1, ZHU Ming-wang1, LIU Yan-de1, 2*. Discrimination of Apple Origin and Prediction of SSC Based on
Multi-Model Decision Fusion[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(10): 2812-2818. |
[4] |
ZHANG Yao-yao1, 2, FU Ying-chun1, 2, WEI Shu-ya1, 2*. The Identification and Analysis of the Modern Binding Media Based on Multiple Analytical Methods[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(10): 2785-2794. |
[5] |
MU Liang-yin1, ZHAO Zhong-gai1*, JIN Sai2, SUN Fu-xin2, LIU Fei1. Near-Infrared Prediction Models for Quality Parameters of Culture Broth in Seed Tank During Citric Acid Fermentation[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(10): 2819-2826. |
[6] |
LIU Rong-xiang1, YANG Zhan-feng1, 2*, LI Jie3*, CAO Zhao1, LI Qiang2, LI Ji-chuan1. FTIR and XPS Studies on the Effect of Ca2+ on the Fotation of Monazite by Octyl Hydroxamic Acid[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(10): 2959-2967. |
[7] |
GUO Zhi-qiang1, ZHANG Bo-tao1, ZENG Yun-liu2*. Study on Sugar Content Detection of Kiwifruit Using Near-Infrared
Spectroscopy Combined With Stacking Ensemble Learning[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(10): 2932-2940. |
[8] |
LU Si, CHEN Xiao-li, SU Qiu-cheng, QI Wei, XIA Sheng-peng, LI Ming, FU Juan*. The Study of Experimental Method on the Characterization of Acidic Properties of Zeolites by in Situ FTIR-Pyridine Adsorption[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2488-2493. |
[9] |
ZHANG Wei1, 2, FENG Wei-wei2, 3*, CAI Zong-qi2, WANG Huan-qing2, YAN Qi1, WANG Qing2, 3. Study on Recognition of Marine Microplastics Using Raman Spectra
Combined With MTF and CNN[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2420-2427. |
[10] |
LÜ Shu-xian. A Study on the Non-Destructive Method of Identifying Chinese Traditional Handmade Paper With Attenuated Total Reflection Fourier Transform Infrared Spectroscopy[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2450-2458. |
[11] |
ZHAO Jing-rui1, WANG Ya-min1, YUAN Yu-xun1, YU Jing1, ZHAO Ming-hui1, DONG Juan1, 3, SUN Jing-tao1, 2, 3, 4*. Study on SERS Detection of Ethyl Carbamate in Grape Spirit[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2467-2475. |
[12] |
CHEN Pei-li1, SONG Da1, 2, ZHOU Zhao-qiu1, CHEN Kai-yue1, SU Qiu-cheng1, LI Cui-qin3*. The Suppression Method of Raman Laser Thermal Effect for Sensitive
Samples[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2476-2481. |
[13] |
WEI Yu-lan, ZHANG Chen-jie, YUAN Ya-xian*, YAO Jian-lin*. In-Situ SERS Monitoring of SPR-Catalyzed Coupling Reaction of
p-Nitroiodobenzene on Noble Metal Nanoparticles[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2482-2487. |
[14] |
WAN Jing-wei1, CHEN Lei2, CHAI Wei3, KONG Wei-gang4, CUI Sheng-feng1. Identification of the Crossing Sequence of Seal Stamps and Ink of
Handwriting/Printed Documents Based on Raman Spectroscopy[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2501-2505. |
[15] |
PENG Jiao-yu1, 2, YANG Ke-li1, 2, DONG Ya-ping1, 2, FENG Hai-tao1, 2, ZHANG Bo1, 3, LI Wu1, 3. Research on the Chemical Species of Borates in Salt Lake Brine and Its Quantitative Analysis by Raman Spectroscopy[J]. SPECTROSCOPY AND SPECTRAL ANALYSIS, 2024, 44(09): 2514-2522. |
|
|
|
|